These Apple Muffins are a delightful treat that combines the natural sweetness of apples with the wholesome goodness of whole wheat flour. Perfect for breakfast or a snack, these muffins are not only easy to make but also versatile enough for various occasions. Whether you’re preparing for a busy weekday morning or hosting a brunch, these muffins will impress everyone with their moist texture and comforting flavors. Plus, they can be made in just one bowl, making cleanup a breeze!
Why You’ll Love This Recipe
- Quick and Easy: These muffins come together in just one bowl, making them simple to whip up even on the busiest days.
- Healthy Ingredients: Made with whole wheat flour and fresh apples, these muffins are packed with nutrients while still being delicious.
- Freezer Friendly: Bake a big batch and freeze them for later! They’re perfect for grabbing on the go.
- Customizable: You can easily add your favorite nuts or dried fruits to the mix for extra flavor and texture.
- Family-Friendly: Kids love them! These muffins are a great way to sneak in some fruit without them even noticing.
Tools and Preparation
To make your baking experience smooth, having the right tools is essential. Gather these items before you start baking.
Essential Kitchen Tools
- Muffin pans (regular or mini)
- Mixing bowls
- Whisk
- Rubber spatula
- Measuring cups and spoons
Why These Tools Matter
- Muffin pans: The right pan ensures even baking and helps achieve that perfect muffin shape.
- Mixing bowls: A sturdy mixing bowl makes it easy to combine ingredients without spills.
- Whisk: A good whisk blends wet ingredients quickly for a smooth batter.
- Rubber spatula: This tool is ideal for folding in dry ingredients without over-mixing.
Ingredients
These apple muffins are quick and easy to make in one bowl! This whole wheat muffins recipe is made with applesauce, fresh apples and cinnamon. Make a batch for your freezer!
- 4 tablespoons unsalted butter (1/4 cup)
- 1/2 cup honey or pure maple syrup
- 1/2 cup unsweetened applesauce
- 1/2 cup plain Greek yogurt
- 1/4 cup milk (dairy, almond, etc.)
- 2 large eggs
- 1 teaspoon vanilla extract
- 1 teaspoon baking soda
- 1/2 teaspoon baking powder
- 1/2 teaspoon salt
- 1 1/2 teaspoons cinnamon
- 1 1/2 cups white whole wheat flour
- 1 large baking apple (chopped (1 1/2 cups, no need to peel))

How to Make Apple Muffins
Step 1: Preheat the Oven
Preheat your oven to 350 degrees F. Spray muffin pans (regular size or mini) with cooking spray. I like to use coconut oil spray for an extra touch of flavor.
Step 2: Melt the Butter
Place the unsalted butter in a large bowl and melt it in the microwave. Alternatively, you can melt it in a pot on the stove over low heat.
Step 3: Combine Wet Ingredients
Add the honey, applesauce, plain Greek yogurt, milk, eggs, and vanilla extract to the bowl with the melted butter. Whisk everything together until well combined.
Step 4: Mix Dry Ingredients
Add the baking soda, baking powder, salt, and cinnamon to the mixture of wet ingredients. Whisk again until everything is thoroughly mixed.
Step 5: Add Flour
Gently fold in the white whole wheat flour. Use a rubber spatula to combine until it’s almost mixed through—don’t overdo it!
Step 6: Incorporate Apples
Add the chopped apple into the batter, reserving a few pieces if you want to place them on top of the muffins. Fold gently until just combined.
Step 7: Fill Muffin Pans
Scoop the batter into your greased muffin pans, filling each well about two-thirds full. If you have reserved apple pieces, press them into the tops of each muffin now.
Step 8: Bake
Bake regular size muffins for about 16-18 minutes or until a tester inserted into the center comes out clean. Mini muffins will take about 12 minutes.
Step 9: Cool Down
Let your muffins cool in the pan for about 10 minutes before transferring them onto a wire rack to finish cooling completely.
Step 10: Storage
Store any leftover muffins in the refrigerator for up to three days or freeze them for up to three months—if they last that long!
How to Serve Apple Muffins
Apple muffins are a delightful treat that can be enjoyed in various ways. Whether you’re serving them for breakfast or as an afternoon snack, these muffins are versatile and delicious.
With a Spread
- Butter – Spread a thin layer of softened butter on warm muffins for extra richness.
- Cream Cheese – A dollop of cream cheese adds a tangy flavor that pairs well with the sweetness of the muffins.
As a Snack
- Nut Butter – Almond or peanut butter can provide a protein boost while enhancing the flavor.
- Yogurt Dip – Serve with a side of Greek yogurt mixed with honey for a creamy contrast.
For Breakfast
- Fruit Salad – A light fruit salad complements the muffins and adds freshness to your meal.
- Smoothie – Pair your muffins with a smoothie made from bananas and spinach for a nutritious start to your day.
How to Perfect Apple Muffins
Perfecting apple muffins is all about technique and ingredient selection. Follow these tips to ensure your muffins come out moist and flavorful every time.
- Use Fresh Apples – Fresh, crisp apples enhance the flavor and texture of your muffins.
- Don’t Overmix – Mix just until combined to keep your muffins light and fluffy.
- Check Doneness Early – Start checking for doneness a few minutes before the timer goes off to avoid overbaking.
- Cool in Pan Briefly – Let them cool in the pan for 10 minutes to prevent sogginess but transfer them quickly to a wire rack afterward.

Best Side Dishes for Apple Muffins
Apple muffins pair wonderfully with several side dishes that can elevate your meal experience. Here are some delicious options:
- Scrambled Eggs – Fluffy scrambled eggs make for a hearty breakfast alongside apple muffins.
- Oatmeal – A warm bowl of oatmeal topped with nuts or fruit can create a balanced meal.
- Fresh Berries – A medley of fresh berries provides vibrant color and tartness that contrasts nicely with sweet muffins.
- Cheese Platter – A selection of cheeses can add savory notes that complement the sweet flavors of apple muffins.
- Cottage Cheese – Creamy cottage cheese topped with cinnamon offers protein and pairs well with apple flavors.
- Granola – Crunchy granola sprinkled on top adds texture and makes for an enjoyable combination.
Common Mistakes to Avoid
When making apple muffins, avoiding common errors can lead to a better baking experience and tastier results. Here are some mistakes to watch out for:
- Bold measurement errors: Not measuring ingredients accurately can throw off the texture and flavor. Always use measuring cups and spoons for precision.
- Bold neglecting the oven temperature: Baking at the wrong temperature may result in undercooked or burnt muffins. Preheat your oven properly and use an oven thermometer if needed.
- Bold overmixing the batter: Mixing too much can lead to tough muffins. Stir until just combined for a light, fluffy texture.
- Bold skipping ingredient substitutions: Using different types of flour or sweeteners without adjusting other ingredients may affect the outcome. Familiarize yourself with how substitutions impact baking.
- Bold forgetting to cool before storing: Storing hot muffins can create moisture and cause them to become soggy. Allow them to cool completely before putting them in containers.
Storage and Reheating
Refrigerator Storage
- Store apple muffins in an airtight container.
- They will last up to 3 days in the refrigerator.
- Ensure they are completely cooled before storing to prevent moisture buildup.
Freezing Apple Muffins
- Freeze apple muffins in a freezer-safe bag or container.
- They can be stored for up to 3 months.
- Label the bags with the date for easy tracking.
Reheating Apple Muffins
- Oven: Preheat to 350°F, warm muffins for about 10-15 minutes until heated through.
- Microwave: Heat one muffin at a time on high for about 10-15 seconds, checking for doneness.
- Stovetop: Place muffins in a skillet over low heat, cover, and warm for about 5 minutes, flipping halfway through.

Frequently Asked Questions
What type of apples are best for apple muffins?
Using a firm variety like Honeycrisp or Granny Smith adds great flavor and texture. They hold up well during baking.
How can I make my apple muffins healthier?
You can substitute part of the flour with oatmeal or add nuts for extra nutrition. Reducing sugar slightly also helps.
Can I use different fruits in my muffins?
Absolutely! Feel free to experiment with berries or pears along with apples for delicious variations in flavor.
How do I know when my apple muffins are done?
Insert a toothpick into the center; if it comes out clean or with just a few crumbs, they are ready!
Can I make these apple muffins gluten-free?
Yes! Substitute white whole wheat flour with a gluten-free flour blend designed for baking.
Conclusion
These apple muffins are not only simple to prepare but also incredibly versatile. With options to customize flavors and ingredients, you can make them fit any occasion or preference. Whether enjoyed fresh out of the oven or stored for later, they’re sure to become a favorite in your household!
Apple Muffins
- Total Time: 33 minutes
- Yield: Approximately 12 muffins 1x
Description
Delight in the warm, comforting flavors of these Apple Muffins—an ideal treat for breakfast or a snack. Bursting with the natural sweetness of fresh apples and infused with cinnamon, these whole wheat muffins are not only delicious but also nutritious. Perfectly moist and fluffy, they come together easily in just one bowl, making them a hassle-free option for busy mornings or brunch gatherings. Plus, they’re freezer-friendly, so you can enjoy them whenever cravings strike!
Ingredients
- 4 tablespoons unsalted butter
- 1/2 cup honey or pure maple syrup
- 1/2 cup unsweetened applesauce
- 1/2 cup plain Greek yogurt
- 1/4 cup milk (dairy or non-dairy)
- 2 large eggs
- 1 teaspoon vanilla extract
- 1 teaspoon baking soda
- 1/2 teaspoon baking powder
- 1/2 teaspoon salt
- 1 1/2 teaspoons cinnamon
- 1 1/2 cups white whole wheat flour
- 1 large apple (chopped)
Instructions
- Preheat your oven to 350°F and prepare your muffin pans with cooking spray.
- Melt the unsalted butter in a large bowl.
- Add honey, applesauce, Greek yogurt, milk, eggs, and vanilla to the melted butter; whisk until combined.
- Stir in baking soda, baking powder, salt, and cinnamon; mix well.
- Gently fold in white whole wheat flour until just combined.
- Incorporate chopped apple gently into the batter.
- Fill muffin pans two-thirds full and bake for 16-18 minutes.
- Cool in the pan for 10 minutes before transferring to a wire rack.
- Prep Time: 15 minutes
- Cook Time: 18 minutes
- Category: Breakfast & Brunch
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin (60g)
- Calories: 160
- Sugar: 9g
- Sodium: 120mg
- Fat: 6g
- Saturated Fat: 3g
- Unsaturated Fat: 2g
- Trans Fat: 0g
- Carbohydrates: 24g
- Fiber: 3g
- Protein: 4g
- Cholesterol: 35mg



